STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grem1Gremlin 1a, DAN family BMP antagonist. (176 aa)    
Predicted Functional Partners:
GREM1
Gremlin; Belongs to the DAN family.
  
  
 
0.902
bmp2
Bone morphogenetic protein 2b.
    
 0.790
bmp4
Bone morphogenetic protein 4.
    
 0.790
LOC101069608
Bone morphogenetic protein 16.
    
 0.790
BMP7
Bone morphogenetic protein 7.
    
 0.731
bmp6
Bone morphogenetic protein 6.
    
 0.731
bmp5
Bone morphogenetic protein 5.
    
 0.731
bmp7
Bone morphogenetic protein 7b.
    
 0.731
bmp8a
Bone morphogenetic protein 8a.
    
 0.697
LOC101068913
Growth differentiation factor 6a.
    
 0.680
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.