Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101069975 | OTP | ENSTRUP00000008519 | ENSTRUP00000046858 | Nescient helix loop helix 2. | Orthopedia homeobox. | 0.405 |
LOC101073060 | OTP | ENSTRUP00000060734 | ENSTRUP00000046858 | RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. | Orthopedia homeobox. | 0.450 |
OTP | LOC101069975 | ENSTRUP00000046858 | ENSTRUP00000008519 | Orthopedia homeobox. | Nescient helix loop helix 2. | 0.405 |
OTP | LOC101073060 | ENSTRUP00000046858 | ENSTRUP00000060734 | Orthopedia homeobox. | RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. | 0.450 |
OTP | Sox2 | ENSTRUP00000046858 | ENSTRUP00000011608 | Orthopedia homeobox. | SRY-box transcription factor 2. | 0.448 |
OTP | hopx | ENSTRUP00000046858 | ENSTRUP00000051508 | Orthopedia homeobox. | HOP homeobox. | 0.562 |
OTP | mtr | ENSTRUP00000046858 | ENSTRUP00000075554 | Orthopedia homeobox. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.660 |
OTP | pax8 | ENSTRUP00000046858 | ENSTRUP00000074473 | Orthopedia homeobox. | Paired box 8. | 0.486 |
OTP | tbx20 | ENSTRUP00000046858 | ENSTRUP00000013716 | Orthopedia homeobox. | T-box transcription factor 20. | 0.467 |
Sox2 | OTP | ENSTRUP00000011608 | ENSTRUP00000046858 | SRY-box transcription factor 2. | Orthopedia homeobox. | 0.448 |
hopx | OTP | ENSTRUP00000051508 | ENSTRUP00000046858 | HOP homeobox. | Orthopedia homeobox. | 0.562 |
hopx | pax8 | ENSTRUP00000051508 | ENSTRUP00000074473 | HOP homeobox. | Paired box 8. | 0.456 |
mtr | OTP | ENSTRUP00000075554 | ENSTRUP00000046858 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Orthopedia homeobox. | 0.660 |
pax8 | OTP | ENSTRUP00000074473 | ENSTRUP00000046858 | Paired box 8. | Orthopedia homeobox. | 0.486 |
pax8 | hopx | ENSTRUP00000074473 | ENSTRUP00000051508 | Paired box 8. | HOP homeobox. | 0.456 |
tbx20 | OTP | ENSTRUP00000013716 | ENSTRUP00000046858 | T-box transcription factor 20. | Orthopedia homeobox. | 0.467 |