STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr41WD repeat domain 41. (276 aa)    
Predicted Functional Partners:
c9orf72
Zgc:100846.
    
 0.993
LOC101078682
Smith-Magenis syndrome chromosome region, candidate 8a.
    
 0.993
LOC101070002
Smith-Magenis syndrome chromosome region, candidate 8b.
    
 0.971
ENSTRUP00000086078
annotation not available
    
 
 0.922
plk3
Serine/threonine-protein kinase PLK.
   
 0.884
LOC101076451
Fizzy/cell division cycle 20 related 1b.
   
 0.806
intu
Inturned planar cell polarity protein.
   
 0.806
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.806
LOC101063487
Cell division cycle 20 homolog.
   
 0.806
ENSTRUP00000069968
annotation not available
   
 0.806
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.