STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RILPL1Rab interacting lysosomal protein like 1. (428 aa)    
Predicted Functional Partners:
ccnb3
Cyclin B3; Belongs to the cyclin family.
      
 0.504
LOC101075327
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.501
OSBPL1A
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.501
LOC101073808
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.500
LOC101064389
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.500
LOC101063766
Uncharacterized protein.
      
 0.497
rab12
RAB12, member RAS oncogene family.
    
 0.422
LOC101076529
RAB7a, member RAS oncogene family.
    
 0.415
RAB28
RAB28, member RAS oncogene family.
    
 0.415
LOC101061812
RAB7A, member RAS oncogene family.
    
 0.415
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.