STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timp4TIMP metallopeptidase inhibitor 4, tandem duplicate 2. (224 aa)    
Predicted Functional Partners:
mmp9
Uncharacterized protein.
    
 0.813
wap65-2
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
    
 0.716
hpx
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
    
 0.683
Mmp24
Matrix metalloproteinase-24 (membrane-inserted).
    
 0.679
LOC101070441
Matrix metallopeptidase 16.
    
 0.665
snap47
Synaptosome associated protein 47.
      
 0.630
LOC101061607
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.587
LOC101071448
Matrix metallopeptidase 15b.
    
 0.587
adam10
ADAM metallopeptidase domain 10.
    
 0.571
mmp28
PG_binding_1 domain-containing protein.
    
 0.569
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.