STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064682Baculoviral IAP repeat containing 5b. (152 aa)    
Predicted Functional Partners:
cdca8
Cell division cycle associated 8.
   
 0.993
incenp
Uncharacterized protein.
   
 0.974
LOC101066041
Diablo, IAP-binding mitochondrial protein a.
    
 0.973
LOC101064478
Diablo, IAP-binding mitochondrial protein a.
    
 0.973
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.961
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.946
CASP3
Caspase 3; Belongs to the peptidase C14A family.
   
 0.944
LOC101074856
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.944
casp7
Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.944
htra2
Si:dkey-33c12.12.
    
 0.939
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.