Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSTRUP00000065581 | JUND | ENSTRUP00000065581 | ENSTRUP00000014544 | annotation not available | BZIP domain-containing protein. | 0.512 |
ENSTRUP00000065581 | LOC101076843 | ENSTRUP00000065581 | ENSTRUP00000052571 | annotation not available | JunD proto-oncogene, AP-1 transcription factor subunit. | 0.512 |
ENSTRUP00000065581 | LOC101077059 | ENSTRUP00000065581 | ENSTRUP00000048623 | annotation not available | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.512 |
ENSTRUP00000065581 | c-JunL | ENSTRUP00000065581 | ENSTRUP00000053894 | annotation not available | C-JunL protein; Belongs to the bZIP family. | 0.512 |
ENSTRUP00000065581 | junb | ENSTRUP00000065581 | ENSTRUP00000017450 | annotation not available | JunB protein. | 0.512 |
ENSTRUP00000065581 | med10 | ENSTRUP00000065581 | ENSTRUP00000056015 | annotation not available | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.501 |
ENSTRUP00000065581 | med14 | ENSTRUP00000065581 | ENSTRUP00000054217 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.594 |
ENSTRUP00000065581 | med17 | ENSTRUP00000065581 | ENSTRUP00000010138 | annotation not available | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.594 |
ENSTRUP00000065581 | med7 | ENSTRUP00000065581 | ENSTRUP00000076080 | annotation not available | Mediator of RNA polymerase II transcription subunit 7. | 0.573 |
ENSTRUP00000065581 | wnk4 | ENSTRUP00000065581 | ENSTRUP00000048869 | annotation not available | WNK lysine deficient protein kinase 4b. | 0.507 |
JUND | ENSTRUP00000065581 | ENSTRUP00000014544 | ENSTRUP00000065581 | BZIP domain-containing protein. | annotation not available | 0.512 |
JUND | LOC101076843 | ENSTRUP00000014544 | ENSTRUP00000052571 | BZIP domain-containing protein. | JunD proto-oncogene, AP-1 transcription factor subunit. | 0.902 |
JUND | LOC101077059 | ENSTRUP00000014544 | ENSTRUP00000048623 | BZIP domain-containing protein. | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.870 |
JUND | junb | ENSTRUP00000014544 | ENSTRUP00000017450 | BZIP domain-containing protein. | JunB protein. | 0.724 |
JUND | wnk4 | ENSTRUP00000014544 | ENSTRUP00000048869 | BZIP domain-containing protein. | WNK lysine deficient protein kinase 4b. | 0.512 |
LOC101076843 | ENSTRUP00000065581 | ENSTRUP00000052571 | ENSTRUP00000065581 | JunD proto-oncogene, AP-1 transcription factor subunit. | annotation not available | 0.512 |
LOC101076843 | JUND | ENSTRUP00000052571 | ENSTRUP00000014544 | JunD proto-oncogene, AP-1 transcription factor subunit. | BZIP domain-containing protein. | 0.902 |
LOC101076843 | LOC101077059 | ENSTRUP00000052571 | ENSTRUP00000048623 | JunD proto-oncogene, AP-1 transcription factor subunit. | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.871 |
LOC101076843 | junb | ENSTRUP00000052571 | ENSTRUP00000017450 | JunD proto-oncogene, AP-1 transcription factor subunit. | JunB protein. | 0.728 |
LOC101076843 | wnk4 | ENSTRUP00000052571 | ENSTRUP00000048869 | JunD proto-oncogene, AP-1 transcription factor subunit. | WNK lysine deficient protein kinase 4b. | 0.512 |
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