STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1cbSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (326 aa)    
Predicted Functional Partners:
ppp1r12a
Protein phosphatase 1 regulatory subunit.
   
 0.978
H2T0Q0_TAKRU
ANK_REP_REGION domain-containing protein.
   
 0.978
LOC101075419
Cleavage and polyadenylation specific factor 3.
   
 0.967
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.966
LOC101063966
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
     
 0.963
LOC115246431
Retinoblastoma 1.
   
 0.957
LOC101064018
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
0.957
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.957
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.956
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.950
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.