STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068020CD40 ligand; Belongs to the tumor necrosis factor family. (232 aa)    
Predicted Functional Partners:
cd40
CD40.
   
 0.991
LOC101061564
Uncharacterized protein.
   
 0.976
LOC101074300
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
   
 
 0.961
LOC101073138
Uncharacterized protein.
   
 0.842
LOC101061342
TNF receptor superfamily member 11b.
   
 0.835
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.812
tnfsf13b
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
   
 
 0.806
ENSTRUP00000066347
Tumor necrosis factor receptor superfamily member 5-like.
   
 0.777
LOC101068097
Tenascin C.
    
   0.761
cd4
T-cell surface glycoprotein CD4.
   
 0.756
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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