STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl3Kelch-like family member 3. (633 aa)    
Predicted Functional Partners:
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.836
ENSTRUP00000017266
N-acetylneuraminic acid phosphatase.
   
 
 0.569
NANP
N-acetylneuraminic acid phosphatase.
   
 
 0.569
LOC115248454
RING-box protein 1.
    
 0.545
LOC101079814
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.545
mad2l2
Mitotic arrest deficient 2 like 2.
    
   0.536
bbs9
Bardet-Biedl syndrome 9.
    
 0.528
dcun1d4
DCN1-like protein.
   
 
 0.504
ttc8
Tetratricopeptide repeat domain 8.
    
 0.497
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.496
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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