STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067160Rac family small GTPase 1b. (192 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
    
 0.989
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.973
pak1
Non-specific serine/threonine protein kinase.
   
 0.972
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
   
 0.971
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 0.968
LOC101072459
BAI1-associated protein 2a.
   
 0.966
pak2
Non-specific serine/threonine protein kinase.
   
 0.965
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.962
iqgap1
IQ motif containing GTPase activating protein 1.
   
 0.962
VAV1
Vav guanine nucleotide exchange factor 1.
   
 0.961
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.