STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d14TBC1 domain family, member 14. (694 aa)    
Predicted Functional Partners:
Wdfy4
WDFY family member 4.
      
 0.565
trappc8
Trafficking protein particle complex 8.
    
 
 0.547
trappc12
Trafficking protein particle complex 12.
    
 
 0.514
LOC101073928
Uncharacterized protein.
    
 0.508
LOC101074373
Uncharacterized protein.
    
 0.508
rab11a
RAB11a, member RAS oncogene family.
    
 0.508
LOC101073559
RAB11a, member RAS oncogene family, like.
    
 0.508
LOC101065023
Ras-related protein Rab-11B-like.
    
 0.508
LOC101067934
Uncharacterized protein.
    
 0.503
rabl2b
RAB, member of RAS oncogene family-like 2.
    
 0.503
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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