STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074049Si:dkey-246g23.2. (238 aa)    
Predicted Functional Partners:
atp9b
PhoLip_ATPase_N domain-containing protein.
    
 
 0.522
Ccdc103
Coiled-coil domain-containing protein 103.
    
 
 0.470
ATP9A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 
 0.470
dop1b
DOP1 leucine zipper like protein B.
    
 
 0.462
dop1a
DOP1 leucine zipper like protein A.
    
 
 0.462
ctns
Cystinosin, lysosomal cystine transporter.
   
 
 0.418
prpf38b
Uncharacterized protein.
      
 0.404
scoc
Short coiled-coil protein isoform X1.
      
 0.404
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.