STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000050940Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
Adgb
Androglobin isoform X1.
 
      0.899
ENSTRUP00000079701
Androglobin-like.
 
      0.899
LOC101077791
Uncharacterized protein.
   
 
  0.563
H2UMK9_TAKRU
Uncharacterized protein.
   
 0.537
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 
 0.493
LOC101070744
Grancalcin.
   
 0.415
pef1
Penta-EF-hand domain containing 1.
   
 0.415
LOC101066788
Uncharacterized protein.
   
 0.415
pdcd6
Programmed cell death 6.
   
 0.415
LOC101068021
Calpain, small subunit 1 b.
   
 0.415
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.