STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105417793Uncharacterized protein. (109 aa)    
Predicted Functional Partners:
LOC101069264
Guanylate cyclase.
   
 
 0.503
LOC101074666
Guanylate cyclase.
   
 
 0.470
ENSTRUP00000070610
annotation not available
   
 
 0.470
LOC101073658
Guanylate cyclase.
   
 
 0.417
LOC101074483
Guanylate cyclase.
   
 
 0.417
npr3
Natriuretic peptide receptor 3.
   
 
 0.417
LOC101072570
Guanylate cyclase.
   
 
 0.417
LOC101072043
Guanylate cyclase.
   
 
 0.417
gucy2f
Guanylate cyclase.
   
 
 0.417
LOC101062907
Guanylate cyclase.
   
 
 0.417
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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