Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101064242 | lgr4 | ENSTRUP00000024336 | ENSTRUP00000071476 | R-spondin 1. | Leucine-rich repeat containing G protein-coupled receptor 4. | 0.993 |
LOC101064242 | lgr5 | ENSTRUP00000024336 | ENSTRUP00000078817 | R-spondin 1. | Leucine-rich repeat-containing G protein-coupled receptor 5. | 0.992 |
LOC101064242 | rnf215 | ENSTRUP00000024336 | ENSTRUP00000051801 | R-spondin 1. | Uncharacterized protein. | 0.652 |
LOC101064242 | rps27a | ENSTRUP00000024336 | ENSTRUP00000027679 | R-spondin 1. | Ribosomal protein S27a. | 0.579 |
LOC101064242 | rspo2 | ENSTRUP00000024336 | ENSTRUP00000055254 | R-spondin 1. | R-spondin 2. | 0.958 |
LOC101064242 | rspo3 | ENSTRUP00000024336 | ENSTRUP00000071183 | R-spondin 1. | R-spondin 3. | 0.954 |
LOC101073405 | rnf215 | ENSTRUP00000069487 | ENSTRUP00000051801 | Vasotocin-neurophysin VT 1; Vasotocin is probably an antidiuretic hormone. | Uncharacterized protein. | 0.524 |
LOC101073405 | rps27a | ENSTRUP00000069487 | ENSTRUP00000027679 | Vasotocin-neurophysin VT 1; Vasotocin is probably an antidiuretic hormone. | Ribosomal protein S27a. | 0.503 |
LOC101073405 | trip12 | ENSTRUP00000069487 | ENSTRUP00000016171 | Vasotocin-neurophysin VT 1; Vasotocin is probably an antidiuretic hormone. | Thyroid hormone receptor interactor 12. | 0.916 |
LOC101073405 | uba52 | ENSTRUP00000069487 | ENSTRUP00000009801 | Vasotocin-neurophysin VT 1; Vasotocin is probably an antidiuretic hormone. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.418 |
bag6 | rnf215 | ENSTRUP00000014707 | ENSTRUP00000051801 | BCL2 associated athanogene 6. | Uncharacterized protein. | 0.570 |
bag6 | rps27a | ENSTRUP00000014707 | ENSTRUP00000027679 | BCL2 associated athanogene 6. | Ribosomal protein S27a. | 0.467 |
lgr4 | LOC101064242 | ENSTRUP00000071476 | ENSTRUP00000024336 | Leucine-rich repeat containing G protein-coupled receptor 4. | R-spondin 1. | 0.993 |
lgr4 | lgr5 | ENSTRUP00000071476 | ENSTRUP00000078817 | Leucine-rich repeat containing G protein-coupled receptor 4. | Leucine-rich repeat-containing G protein-coupled receptor 5. | 0.937 |
lgr4 | rnf215 | ENSTRUP00000071476 | ENSTRUP00000051801 | Leucine-rich repeat containing G protein-coupled receptor 4. | Uncharacterized protein. | 0.585 |
lgr4 | rps27a | ENSTRUP00000071476 | ENSTRUP00000027679 | Leucine-rich repeat containing G protein-coupled receptor 4. | Ribosomal protein S27a. | 0.618 |
lgr4 | rspo2 | ENSTRUP00000071476 | ENSTRUP00000055254 | Leucine-rich repeat containing G protein-coupled receptor 4. | R-spondin 2. | 0.988 |
lgr4 | rspo3 | ENSTRUP00000071476 | ENSTRUP00000071183 | Leucine-rich repeat containing G protein-coupled receptor 4. | R-spondin 3. | 0.982 |
lgr5 | LOC101064242 | ENSTRUP00000078817 | ENSTRUP00000024336 | Leucine-rich repeat-containing G protein-coupled receptor 5. | R-spondin 1. | 0.992 |
lgr5 | lgr4 | ENSTRUP00000078817 | ENSTRUP00000071476 | Leucine-rich repeat-containing G protein-coupled receptor 5. | Leucine-rich repeat containing G protein-coupled receptor 4. | 0.937 |
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