Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PDCL3 | cct2 | ENSTRUP00000038437 | ENSTRUP00000003587 | Phosducin like 3. | Chaperonin containing TCP1, subunit 2 (beta). | 0.898 |
PDCL3 | cct3 | ENSTRUP00000038437 | ENSTRUP00000001254 | Phosducin like 3. | T-complex protein 1 subunit gamma. | 0.905 |
PDCL3 | cct4 | ENSTRUP00000038437 | ENSTRUP00000051960 | Phosducin like 3. | T-complex protein 1 subunit delta; Component of the chaperonin-containing T-complex (TRiC), a molecular chaperone complex that assists the folding of proteins upon ATP hydrolysis. | 0.928 |
PDCL3 | cct5 | ENSTRUP00000038437 | ENSTRUP00000023336 | Phosducin like 3. | Chaperonin containing TCP1, subunit 5 (epsilon). | 0.881 |
PDCL3 | cct6a | ENSTRUP00000038437 | ENSTRUP00000025767 | Phosducin like 3. | Chaperonin containing TCP1, subunit 6A (zeta 1). | 0.920 |
PDCL3 | cct7 | ENSTRUP00000038437 | ENSTRUP00000053029 | Phosducin like 3. | T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. | 0.905 |
PDCL3 | cct8 | ENSTRUP00000038437 | ENSTRUP00000043927 | Phosducin like 3. | Chaperonin containing TCP1, subunit 8 (theta). | 0.877 |
PDCL3 | tcp1 | ENSTRUP00000038437 | ENSTRUP00000014514 | Phosducin like 3. | T-complex 1. | 0.934 |
cct2 | PDCL3 | ENSTRUP00000003587 | ENSTRUP00000038437 | Chaperonin containing TCP1, subunit 2 (beta). | Phosducin like 3. | 0.898 |
cct2 | cct3 | ENSTRUP00000003587 | ENSTRUP00000001254 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex protein 1 subunit gamma. | 0.999 |
cct2 | cct4 | ENSTRUP00000003587 | ENSTRUP00000051960 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex protein 1 subunit delta; Component of the chaperonin-containing T-complex (TRiC), a molecular chaperone complex that assists the folding of proteins upon ATP hydrolysis. | 0.999 |
cct2 | cct5 | ENSTRUP00000003587 | ENSTRUP00000023336 | Chaperonin containing TCP1, subunit 2 (beta). | Chaperonin containing TCP1, subunit 5 (epsilon). | 0.999 |
cct2 | cct6a | ENSTRUP00000003587 | ENSTRUP00000025767 | Chaperonin containing TCP1, subunit 2 (beta). | Chaperonin containing TCP1, subunit 6A (zeta 1). | 0.999 |
cct2 | cct7 | ENSTRUP00000003587 | ENSTRUP00000053029 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. | 0.999 |
cct2 | cct8 | ENSTRUP00000003587 | ENSTRUP00000043927 | Chaperonin containing TCP1, subunit 2 (beta). | Chaperonin containing TCP1, subunit 8 (theta). | 0.999 |
cct2 | pfdn5 | ENSTRUP00000003587 | ENSTRUP00000017575 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin 5. | 0.851 |
cct2 | tcp1 | ENSTRUP00000003587 | ENSTRUP00000014514 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex 1. | 0.999 |
cct3 | PDCL3 | ENSTRUP00000001254 | ENSTRUP00000038437 | T-complex protein 1 subunit gamma. | Phosducin like 3. | 0.905 |
cct3 | cct2 | ENSTRUP00000001254 | ENSTRUP00000003587 | T-complex protein 1 subunit gamma. | Chaperonin containing TCP1, subunit 2 (beta). | 0.999 |
cct3 | cct4 | ENSTRUP00000001254 | ENSTRUP00000051960 | T-complex protein 1 subunit gamma. | T-complex protein 1 subunit delta; Component of the chaperonin-containing T-complex (TRiC), a molecular chaperone complex that assists the folding of proteins upon ATP hydrolysis. | 0.999 |
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