STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105417929SCY domain-containing protein. (126 aa)    
Predicted Functional Partners:
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.971
pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.969
pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 0.966
H2TKZ1_TAKRU
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
LOC101071349
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
LOC101061903
Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
LOC101070891
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
pola1
DNA polymerase.
    
 0.870
pold1
DNA polymerase.
    
 0.837
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.807
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.