STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc32Coiled-coil domain containing 32. (192 aa)    
Predicted Functional Partners:
H2UD51_TAKRU
Mitochondrial ribosomal protein L41.
   
 
 0.774
mrpl32
Mitochondrial ribosomal protein L32.
   
 
 0.769
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.758
mrps33
Mitochondrial ribosomal protein S33.
   
 
 0.750
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.735
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.729
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.727
dap3
Death associated protein 3.
   
 
 0.710
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.707
Mrpl21
Uncharacterized protein.
   
 
 0.699
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.