STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD66Ankyrin repeat domain 66. (145 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
    
 0.777
LOC101067363
Protein phosphatase 6, regulatory subunit 2a.
    
 0.646
LOC101066797
Protein phosphatase 6, regulatory subunit 2b.
    
 0.646
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.646
ift88
Intraflagellar transport 88 homolog.
   
 0.466
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.453
LOC101070359
COMM domain containing 4.
    
 0.430
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.429
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.420
LOC101061101
REL proto-oncogene, NF-kB subunit.
   
 0.420
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.