STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn1Tyrosine-protein phosphatase non-receptor type. (440 aa)    
Predicted Functional Partners:
LOC101074083
Tyrosine-protein kinase receptor.
   
 0.971
LOC101069496
Insulin receptor substrate 2b.
    
 0.917
LOC101076043
Insulin receptor substrate 2a.
    
 0.917
LOC101074788
Insulin receptor substrate 4a.
    
 0.917
LOC101069368
Si:ch73-335l21.1.
    
 0.917
LOC101072794
Si:ch211-284e13.4.
    
 0.917
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.914
LOC101069214
Uncharacterized protein.
    
 0.912
ENSTRUP00000078624
Uncharacterized protein.
 
 
   0.773
LOC101074430
Tyrosine-protein kinase receptor.
   
 0.728
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.