Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101073058 | nipa1 | ENSTRUP00000085428 | ENSTRUP00000024268 | Atlastin GTPase 2. | NIPA magnesium transporter 1. | 0.432 |
LOC101073058 | reep1-2 | ENSTRUP00000085428 | ENSTRUP00000052940 | Atlastin GTPase 2. | Receptor expression-enhancing protein. | 0.555 |
LOC101073058 | rtn2 | ENSTRUP00000085428 | ENSTRUP00000051371 | Atlastin GTPase 2. | Reticulon. | 0.442 |
LOC101073058 | spast | ENSTRUP00000085428 | ENSTRUP00000000269 | Atlastin GTPase 2. | Spastin; Belongs to the AAA ATPase family. | 0.599 |
atl1 | nipa1 | ENSTRUP00000070891 | ENSTRUP00000024268 | Atlastin GTPase 1. | NIPA magnesium transporter 1. | 0.566 |
atl1 | reep1-2 | ENSTRUP00000070891 | ENSTRUP00000052940 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.635 |
atl1 | reep2 | ENSTRUP00000070891 | ENSTRUP00000072623 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.527 |
atl1 | rtn2 | ENSTRUP00000070891 | ENSTRUP00000051371 | Atlastin GTPase 1. | Reticulon. | 0.560 |
atl1 | spast | ENSTRUP00000070891 | ENSTRUP00000000269 | Atlastin GTPase 1. | Spastin; Belongs to the AAA ATPase family. | 0.661 |
atl1 | spg11 | ENSTRUP00000070891 | ENSTRUP00000036961 | Atlastin GTPase 1. | Spatacsin_C domain-containing protein. | 0.487 |
atl1 | washc5 | ENSTRUP00000070891 | ENSTRUP00000067920 | Atlastin GTPase 1. | WASH complex subunit 5. | 0.432 |
atl1 | zfyve27 | ENSTRUP00000070891 | ENSTRUP00000017218 | Atlastin GTPase 1. | Zinc finger, FYVE domain containing 27. | 0.457 |
atl3 | reep1-2 | ENSTRUP00000031024 | ENSTRUP00000052940 | Atlastin 3. | Receptor expression-enhancing protein. | 0.533 |
atl3 | rtn2 | ENSTRUP00000031024 | ENSTRUP00000051371 | Atlastin 3. | Reticulon. | 0.454 |
atl3 | spast | ENSTRUP00000031024 | ENSTRUP00000000269 | Atlastin 3. | Spastin; Belongs to the AAA ATPase family. | 0.565 |
nipa1 | LOC101073058 | ENSTRUP00000024268 | ENSTRUP00000085428 | NIPA magnesium transporter 1. | Atlastin GTPase 2. | 0.432 |
nipa1 | atl1 | ENSTRUP00000024268 | ENSTRUP00000070891 | NIPA magnesium transporter 1. | Atlastin GTPase 1. | 0.566 |
nipa1 | reep1-2 | ENSTRUP00000024268 | ENSTRUP00000052940 | NIPA magnesium transporter 1. | Receptor expression-enhancing protein. | 0.566 |
nipa1 | spast | ENSTRUP00000024268 | ENSTRUP00000000269 | NIPA magnesium transporter 1. | Spastin; Belongs to the AAA ATPase family. | 0.543 |
nipa1 | spg11 | ENSTRUP00000024268 | ENSTRUP00000036961 | NIPA magnesium transporter 1. | Spatacsin_C domain-containing protein. | 0.403 |
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