STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setbp1SET binding protein 1. (1494 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
  
 
 0.662
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.618
prdm16
Si:ch211-263k4.2.
   
 0.590
setd2
SET domain containing 2, histone lysine methyltransferase.
   
  
 0.585
kdm6a
Lysine (K)-specific demethylase 6A, like.
   
 0.580
LOC101078029
Uncharacterized protein.
   
 0.578
LOC101065748
Lysine (K)-specific demethylase 6B, a.
   
 0.578
arid4b
Translocase of outer mitochondrial membrane 20.
   
 
 0.576
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 
 0.576
ENSTRUP00000064256
annotation not available
   
 
 0.576
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.