STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol7NUC129 domain-containing protein. (241 aa)    
Predicted Functional Partners:
wdr43
WD repeat domain 43.
    
   0.855
wdr75
WD repeat domain 75.
    
   0.855
nol11
Nucleolar protein 11.
    
   0.850
utp15
UTP15 small subunit processome component.
    
   0.850
LOC101061501
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.757
ENSTRUP00000079751
annotation not available
   
 
 0.757
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.753
fcf1
FCF1 rRNA-processing protein.
   
 
 0.720
pak1
Non-specific serine/threonine protein kinase.
      
 0.653
thbs1
Uncharacterized protein.
    
 
 0.653
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.