STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000053515Uncharacterized protein. (414 aa)    
Predicted Functional Partners:
ift88
Intraflagellar transport 88 homolog.
  
 
 0.965
cluap1
Clusterin associated protein 1.
   
 0.950
Ift46
Intraflagellar transport protein 46 homolog isoform X1.
    
 0.943
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.936
ift172
Uncharacterized protein.
    
 0.916
chdh
Choline dehydrogenase.
    
 0.913
TTC26
Intraflagellar transport protein 56 isoform X1.
  
 0.911
LOC101076242
Uncharacterized protein.
  
 0.911
H2TN72_TAKRU
Uncharacterized protein.
   
 0.909
LOC101068784
Uncharacterized protein.
   
 0.909
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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