STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yju2YJU2 splicing factor homolog. (328 aa)    
Predicted Functional Partners:
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.995
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.994
cwc25
CWC25 spliceosome associated protein homolog.
   
 0.991
plrg1
Pleiotropic regulator 1.
    
 
 0.988
cwc22
CWC22 spliceosome associated protein homolog.
    
 0.988
xab2
XPA binding protein 2.
    
 
 0.988
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.988
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.986
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.986
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.983
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.