STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhno1Si:ch73-352p4.5. (273 aa)    
Predicted Functional Partners:
slf1
SMC5-SMC6 complex localization factor protein 1.
    
 0.956
rad1
RAD1 homolog (S. pombe).
    
 0.951
hus1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.922
topbp1
DNA topoisomerase II binding protein 1.
    
 0.872
rad9a
RAD9 checkpoint clamp component A.
    
 0.786
ENSTRUP00000050088
Uncharacterized protein.
    
 0.786
CDCA7L
Cell division cycle associated 7b.
    
 0.726
cdca7
Cell division cycle associated 7a.
    
 0.726
CLSPN
Claspin.
     
 0.718
atrip
Uncharacterized protein.
     
 0.684
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.