Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101074705 | LOC101075777 | ENSTRUP00000054784 | ENSTRUP00000007857 | Si:dkey-12j5.1. | Malate synthase-like. | 0.917 |
LOC101074705 | LOC115246463 | ENSTRUP00000054784 | ENSTRUP00000022598 | Si:dkey-12j5.1. | Triosephosphate isomerase. | 0.917 |
LOC101074705 | brix1 | ENSTRUP00000054784 | ENSTRUP00000028803 | Si:dkey-12j5.1. | Brix domain containing 2. | 0.750 |
LOC101074705 | cstf3 | ENSTRUP00000054784 | ENSTRUP00000057197 | Si:dkey-12j5.1. | Cleavage stimulation factor, 3' pre-RNA, subunit 3. | 0.902 |
LOC101074705 | grwd1 | ENSTRUP00000054784 | ENSTRUP00000040792 | Si:dkey-12j5.1. | Glutamate-rich WD repeat containing 1. | 0.871 |
LOC101074705 | mrto4 | ENSTRUP00000054784 | ENSTRUP00000049975 | Si:dkey-12j5.1. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.807 |
LOC101074705 | pgk1 | ENSTRUP00000054784 | ENSTRUP00000066955 | Si:dkey-12j5.1. | Phosphoglycerate kinase. | 0.936 |
LOC101074705 | rpf2 | ENSTRUP00000054784 | ENSTRUP00000046741 | Si:dkey-12j5.1. | Ribosome production factor 2 homolog. | 0.786 |
LOC101074705 | rpl4 | ENSTRUP00000054784 | ENSTRUP00000037473 | Si:dkey-12j5.1. | Ribosomal protein L4. | 0.941 |
LOC101074705 | tsr2 | ENSTRUP00000054784 | ENSTRUP00000022488 | Si:dkey-12j5.1. | TSR2 ribosome maturation factor. | 0.784 |
LOC101075777 | LOC101074705 | ENSTRUP00000007857 | ENSTRUP00000054784 | Malate synthase-like. | Si:dkey-12j5.1. | 0.917 |
LOC101075777 | LOC115246463 | ENSTRUP00000007857 | ENSTRUP00000022598 | Malate synthase-like. | Triosephosphate isomerase. | 0.660 |
LOC101075777 | cstf3 | ENSTRUP00000007857 | ENSTRUP00000057197 | Malate synthase-like. | Cleavage stimulation factor, 3' pre-RNA, subunit 3. | 0.660 |
LOC101075777 | pgk1 | ENSTRUP00000007857 | ENSTRUP00000066955 | Malate synthase-like. | Phosphoglycerate kinase. | 0.671 |
LOC115246463 | LOC101074705 | ENSTRUP00000022598 | ENSTRUP00000054784 | Triosephosphate isomerase. | Si:dkey-12j5.1. | 0.917 |
LOC115246463 | LOC101075777 | ENSTRUP00000022598 | ENSTRUP00000007857 | Triosephosphate isomerase. | Malate synthase-like. | 0.660 |
LOC115246463 | cstf3 | ENSTRUP00000022598 | ENSTRUP00000057197 | Triosephosphate isomerase. | Cleavage stimulation factor, 3' pre-RNA, subunit 3. | 0.991 |
LOC115246463 | mrto4 | ENSTRUP00000022598 | ENSTRUP00000049975 | Triosephosphate isomerase. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.499 |
LOC115246463 | pgk1 | ENSTRUP00000022598 | ENSTRUP00000066955 | Triosephosphate isomerase. | Phosphoglycerate kinase. | 0.999 |
brix1 | LOC101074705 | ENSTRUP00000028803 | ENSTRUP00000054784 | Brix domain containing 2. | Si:dkey-12j5.1. | 0.750 |
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