STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000054801Ankyrin repeat domain-containing protein 33B-like. (380 aa)    
Predicted Functional Partners:
cwc22
CWC22 spliceosome associated protein homolog.
    
 0.890
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.873
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
    
 0.871
srrm1
Serine/arginine repetitive matrix 1.
   
 0.858
cwc25
CWC25 spliceosome associated protein homolog.
   
 0.852
snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
 0.848
snrpg
Small nuclear ribonucleoprotein G.
    
 0.831
slu7
SLU7 homolog, splicing factor.
    
 0.831
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.825
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.825
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.