STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tp53i13Uncharacterized protein. (513 aa)    
Predicted Functional Partners:
LOC101078768
Mitochondrial ribosomal protein L23.
   
 
 0.969
mrpl17
Mitochondrial ribosomal protein L17.
   
 
 0.956
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.952
mrps16
Mitochondrial ribosomal protein S16.
   
   0.951
H2UD51_TAKRU
Mitochondrial ribosomal protein L41.
   
 
 0.947
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.946
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.938
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.935
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.925
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.925
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.