STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076886Forkhead box A3. (461 aa)    
Predicted Functional Partners:
LOC101078876
Kruppel-like factor 17.
    
 0.761
gata6
GATA binding protein 6.
   
 0.720
hhex
Homeobox domain-containing protein.
   
  
 0.718
gata5
Transcription factor GATA-5 isoform X1.
   
 0.688
hnf1a
HNF1 homeobox a.
   
 
 0.640
LOC101069919
GATA binding protein 1a.
  
 0.621
klf3
Kruppel like factor 3.
    
 0.612
ENSTRUP00000077588
NRIP1_repr_2 domain-containing protein.
     
 0.587
nr1i2
Nuclear receptor subfamily 1, group I, member 2.
    
 0.581
trps1
Trichorhinophalangeal syndrome I.
    
 0.536
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.