STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcaf11DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family. (539 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
    
 0.965
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.894
cul4a
Cullin 4A; Belongs to the cullin family.
    
 0.894
COPS6
COP9 signalosome subunit 6.
    
 0.826
cops2
COP9 signalosome subunit 2.
    
 0.804
cops3
COP9 signalosome subunit 3.
    
  0.791
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
 0.758
LOC101074738
Retinoblastoma binding protein 5.
    
 0.747
dcaf4
WD repeat domain 21.
     
 0.736
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 0.735
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.