STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000056607annotation not available (530 aa)    
Predicted Functional Partners:
ENSTRUP00000065836
annotation not available
 
     0.880
ENSTRUP00000070900
annotation not available
 
     0.853
ENSTRUP00000078980
annotation not available
 
     0.688
Fancm
ERCC4 domain-containing protein.
    
 0.671
ENSTRUP00000078489
annotation not available
 
     0.634
ENSTRUP00000086391
annotation not available
 
     0.574
ENSTRUP00000075243
annotation not available
 
     0.530
ENSTRUP00000082962
annotation not available
 
     0.528
ENSTRUP00000072273
annotation not available
 
     0.514
ENSTRUP00000049448
Integrase catalytic domain-containing protein.
 
     0.505
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.