STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079335Si:dkey-156n14.3. (1202 aa)    
Predicted Functional Partners:
hal
Par3_HAL_N_term domain-containing protein.
   
 
 0.796
amdhd1
Amidohydrolase domain containing 1.
   
 
 0.723
ftcd
Formimidoyltransferase cyclodeaminase.
   
  
 0.714
serpina10
Si:ch1073-416d2.3; Belongs to the serpin family.
   
  0.570
LOC101072218
Threonine aldolase 1.
      
 0.502
LOC101076410
Nucleoside diphosphate kinase.
   
 0.477
armc10
Armadillo repeat containing 10.
    
 0.474
LOC101076681
Alpha-2-HS-glycoprotein 2.
   
  0.428
LOC105417895
Uncharacterized protein.
   
  0.428
LOC101066220
Coiled-coil-helix-coiled-coil-helix domain containing 4a.
      
 0.420
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.