PRKAR2B protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PRKAR2B

Protein kinase cAMP-dependent type II regulatory subunit beta. (410 aa)

Predicted Functional Partners:

LOC101066292

0.977

LOC101069822

0.977

LOC101067856

0.977

prkar1a

0.909

LOC101067661

0.908

LOC101070911

0.908

LOC101063193

0.908

LOC101067955

0.905

akap10

0.806

prkx

0.780

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101063193	LOC101066292	ENSTRUP00000080025	ENSTRUP00000063491	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.977
LOC101063193	LOC101067661	ENSTRUP00000080025	ENSTRUP00000003365	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Lipase, hormone-sensitive b.	0.908
LOC101063193	LOC101067856	ENSTRUP00000080025	ENSTRUP00000076783	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.977
LOC101063193	LOC101067955	ENSTRUP00000080025	ENSTRUP00000028484	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.	0.901
LOC101063193	LOC101069822	ENSTRUP00000080025	ENSTRUP00000070462	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.977
LOC101063193	LOC101070911	ENSTRUP00000080025	ENSTRUP00000077324	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Lipase, hormone-sensitive a.	0.908
LOC101063193	PRKAR2B	ENSTRUP00000080025	ENSTRUP00000056651	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Protein kinase cAMP-dependent type II regulatory subunit beta.	0.908
LOC101063193	akap10	ENSTRUP00000080025	ENSTRUP00000005767	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	A kinase (PRKA) anchor protein 10.	0.785
LOC101063193	prkar1a	ENSTRUP00000080025	ENSTRUP00000042610	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.	0.909
LOC101063193	prkx	ENSTRUP00000080025	ENSTRUP00000077327	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	Protein kinase X-linked; Belongs to the protein kinase superfamily.	0.780
LOC101066292	LOC101063193	ENSTRUP00000063491	ENSTRUP00000080025	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	0.977
LOC101066292	LOC101067661	ENSTRUP00000063491	ENSTRUP00000003365	Uncharacterized protein; Belongs to the protein kinase superfamily.	Lipase, hormone-sensitive b.	0.935
LOC101066292	LOC101067856	ENSTRUP00000063491	ENSTRUP00000076783	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC101066292	LOC101067955	ENSTRUP00000063491	ENSTRUP00000028484	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.	0.980
LOC101066292	LOC101069822	ENSTRUP00000063491	ENSTRUP00000070462	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC101066292	LOC101070911	ENSTRUP00000063491	ENSTRUP00000077324	Uncharacterized protein; Belongs to the protein kinase superfamily.	Lipase, hormone-sensitive a.	0.935
LOC101066292	PRKAR2B	ENSTRUP00000063491	ENSTRUP00000056651	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase cAMP-dependent type II regulatory subunit beta.	0.977
LOC101066292	akap10	ENSTRUP00000063491	ENSTRUP00000005767	Uncharacterized protein; Belongs to the protein kinase superfamily.	A kinase (PRKA) anchor protein 10.	0.797
LOC101066292	prkar1a	ENSTRUP00000063491	ENSTRUP00000042610	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.	0.993
LOC101067661	LOC101063193	ENSTRUP00000003365	ENSTRUP00000080025	Lipase, hormone-sensitive b.	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	0.908