STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062854Vasodilator stimulated phosphoprotein a. (397 aa)    
Predicted Functional Partners:
nek2
NIMA-related kinase 2.
    
 0.754
fblim1
Filamin binding LIM protein 1.
    
 0.628
tes
Uncharacterized protein.
   
 0.621
ENSTRUP00000003800
Zyxin.
   
 0.578
lpp
LIM domain containing preferred translocation partner in lipoma.
    
 0.578
LOC105416730
Zyxin.
   
 0.578
trip6
Uncharacterized protein.
    
 0.578
LOC101065989
CRK proto-oncogene, adaptor protein.
    
 
 0.543
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
   
  
 0.531
abl2
Tyrosine-protein kinase.
    
 
 0.513
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.