STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071831Histone H2A-like. (125 aa)    
Predicted Functional Partners:
mysm1
Histone H2A deubiquitinase MYSM1.
    
 0.963
LOC115248315
Histone H2B; Belongs to the histone H2B family.
 
 0.739
LOC115248316
Histone H2B; Belongs to the histone H2B family.
 
 0.739
LOC115248316-2
Histone H2B 1/2-like.
 
 0.739
LOC115248316-3
Histone H2B 1/2-like.
 
 0.739
LOC115253391
Histone H2B; Belongs to the histone H2B family.
 
 0.738
LOC101063387
Histone H2B; Belongs to the histone H2B family.
 
 0.737
LOC101068558
Histone H2B; Belongs to the histone H2B family.
 
 0.736
LOC101062878
Histone H2B; Belongs to the histone H2B family.
 
 0.734
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.722
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.