STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc9Tetratricopeptide repeat domain 9. (243 aa)    
Predicted Functional Partners:
LOC101070860
TSC complex subunit 1b.
   
 0.639
H2UCW4_TAKRU
TSC complex subunit 1.
   
 0.639
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.639
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.639
ENSTRUP00000050149
Si:ch211-131k2.3.
   
 0.606
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.588
LOC101068061
Prostaglandin E synthase 3a (cytosolic).
   
 0.588
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.556
wdr17
WD repeat domain 17.
   
 
 0.502
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.484
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.