STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000057273Oligodendrocyte transcription factor 1. (242 aa)    
Predicted Functional Partners:
LOC101071427
SRY-box transcription factor 10.
   
 0.589
LOC101063644
Inhibitor of DNA binding 4.
    
 
 0.585
gpr17
G protein-coupled receptor 17.
      
 0.512
gprin3
Si:dkeyp-123h10.2.
  
    0.458
LOC101077241
NK2 homeobox 2a.
   
 0.446
H2US58_TAKRU
Homeobox domain-containing protein.
   
 0.446
cxcl14
Chemokine (C-X-C motif) ligand 14.
      
 0.422
id2
Inhibitor of DNA binding 2a.
    
 
 0.401
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.