STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067637Acid-sensing ion channel 1C isoform X1. (550 aa)    
Predicted Functional Partners:
stoml1
Stomatin (EPB72)-like 1.
    
 0.628
LOC101073007
Stomatin (EPB72)-like 3a.
    
 0.453
LOC101075172
Stomatin (EPB72)-like 3b.
    
 0.453
LOC101071319
Stomatin.
    
 0.453
hecw1
Si:ch211-188f17.1.
    
 0.443
LOC101077161
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a.
    
 0.443
nedd4l
NEDD4 like E3 ubiquitin protein ligase.
    
 0.443
nedd4
NEDD4 E3 ubiquitin protein ligase a.
    
 0.443
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.426
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.