STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071723Testis expressed 2. (1181 aa)    
Predicted Functional Partners:
ttc7b
Tetratricopeptide repeat domain 7B.
      
 0.603
nkiras1
NFKB inhibitor interacting Ras-like 1.
      
 0.598
LOC101079469
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
   
  
 0.555
ranbp1
RAN binding protein 1.
      
 0.542
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 
 0.516
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
      
 0.454
tbcd
Tubulin folding cofactor D.
      
 0.426
lman1
Lectin, mannose-binding, 1.
    
  0.405
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.