STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000058476annotation not available (257 aa)    
Predicted Functional Partners:
Fancm
ERCC4 domain-containing protein.
    
 0.671
ENSTRUP00000069854
annotation not available
 
     0.612
ENSTRUP00000060207
annotation not available
 
     0.585
ENSTRUP00000085708
annotation not available
 
     0.584
ENSTRUP00000075400
annotation not available
  
 
   0.469
ENSTRUP00000072440
annotation not available
 
     0.460
ENSTRUP00000056607
annotation not available
 
     0.447
ENSTRUP00000070286
annotation not available
 
     0.447
ENSTRUP00000063532
annotation not available
  
     0.443
ENSTRUP00000064287
Integrase catalytic domain-containing protein.
  
     0.423
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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