STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000059374annotation not available (153 aa)    
Predicted Functional Partners:
grin1
Uncharacterized protein.
   
 0.559
LOC101074532
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.559
gmps
Guanine monophosphate synthase.
  
 
 0.546
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
  
  
 0.518
ak9
Adenylate kinase 9.
   
 0.507
ENSTRUP00000038486
annotation not available
   
 0.487
ENSTRUP00000058125
Adenylate/nucleoside-diphosphate kinase.
   
 0.487
tyms
Thymidylate synthetase.
   
 
 0.482
LOC101077791
Uncharacterized protein.
    
 0.479
LOC101063142
Zgc:174895.
  
 
 0.458
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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