STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000059764annotation not available (432 aa)    
Predicted Functional Partners:
LOC101068676
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
    0.741
LOC101070147
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.741
ENSTRUP00000043867
annotation not available
   
  
 0.731
LOC101070338
Retinol binding protein 3.
   
  
 0.731
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.521
c6
Complement component 6.
   
 0.488
LOC101061440
Si:ch211-103a14.5.
   
    0.459
guca1a
Guanylate cyclase activating protein 1.
   
    0.459
APP
Amyloid beta precursor protein.
   
 0.404
LOC101078447
Amyloid-beta A4 protein; Functional neuronal receptor which couples to intracellular signaling pathway through the GTP-binding protein G(O); Belongs to the APP family.
   
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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