STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062763Uncharacterized protein. (1812 aa)    
Predicted Functional Partners:
LOC101067303
Integrin beta; Belongs to the integrin beta chain family.
    
 0.933
LOC101061453
Integrin beta; Belongs to the integrin beta chain family.
    
 0.933
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.918
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.918
cd44
Link domain-containing protein.
     
 0.901
LOC101079112
Laminin IV type A domain-containing protein.
   
0.858
ENSTRUP00000066477
Uncharacterized protein.
   
0.858
LOC101061410
Laminin N-terminal domain-containing protein.
   
0.858
LAMA2
Laminin subunit alpha 2.
   
0.788
ENSTRUP00000074526
annotation not available
   
0.788
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.