STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fastkd1FAST kinase domains 1. (836 aa)    
Predicted Functional Partners:
fastkd2
FAST kinase domains 2.
      
 0.566
KDM1B
Lysine demethylase 1B.
      
 0.560
ptcd3
Pentatricopeptide repeat domain 3.
  
   
 0.490
fastk
Fas-activated serine/threonine kinase.
      
 0.470
trub2
TruB pseudouridine (psi) synthase family member 2.
      
 0.461
THNSL1
Threonine synthase like 1.
      
 0.434
Zc3h3
Zinc finger CCCH domain-containing protein 3 isoform X1.
   
  
 0.406
LRPPRC
Leucine-rich pentatricopeptide repeat containing.
      
 0.403
cyhr1
Cysteine/histidine-rich 1.
      
 0.402
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
      
 0.402
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.