pax9 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pax9

Paired box 9. (331 aa)

Predicted Functional Partners:

LOC101079804

0.831

slc25a21

0.634

meox2

0.600

msx1

0.589

LOC101069919

0.550

otx1

0.541

hoxd12

0.451

LOC101068129

0.439

GREM1

0.438

H2SIS3_TAKRU

0.435

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GREM1	hoxd12	ENSTRUP00000036213	ENSTRUP00000044945	Gremlin; Belongs to the DAN family.	Homeobox protein Hox-D12a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.	0.432
GREM1	pax9	ENSTRUP00000036213	ENSTRUP00000061100	Gremlin; Belongs to the DAN family.	Paired box 9.	0.438
H2SIS3_TAKRU	pax9	ENSTRUP00000012305	ENSTRUP00000061100	Uncharacterized protein.	Paired box 9.	0.435
LOC101068129	pax9	ENSTRUP00000046432	ENSTRUP00000061100	Orthodenticle homeobox 2b.	Paired box 9.	0.439
LOC101069919	pax9	ENSTRUP00000032355	ENSTRUP00000061100	GATA binding protein 1a.	Paired box 9.	0.550
LOC101079804	pax9	ENSTRUP00000055192	ENSTRUP00000061100	Paired box 10.	Paired box 9.	0.831
hoxd12	GREM1	ENSTRUP00000044945	ENSTRUP00000036213	Homeobox protein Hox-D12a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.	Gremlin; Belongs to the DAN family.	0.432
hoxd12	pax9	ENSTRUP00000044945	ENSTRUP00000061100	Homeobox protein Hox-D12a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.	Paired box 9.	0.451
meox2	pax9	ENSTRUP00000004634	ENSTRUP00000061100	Mesenchyme homeobox 2b.	Paired box 9.	0.600
msx1	pax9	ENSTRUP00000041027	ENSTRUP00000061100	Homeobox domain-containing protein.	Paired box 9.	0.589
otx1	pax9	ENSTRUP00000027897	ENSTRUP00000061100	Orthodenticle homeobox 1.	Paired box 9.	0.541
pax9	GREM1	ENSTRUP00000061100	ENSTRUP00000036213	Paired box 9.	Gremlin; Belongs to the DAN family.	0.438
pax9	H2SIS3_TAKRU	ENSTRUP00000061100	ENSTRUP00000012305	Paired box 9.	Uncharacterized protein.	0.435
pax9	LOC101068129	ENSTRUP00000061100	ENSTRUP00000046432	Paired box 9.	Orthodenticle homeobox 2b.	0.439
pax9	LOC101069919	ENSTRUP00000061100	ENSTRUP00000032355	Paired box 9.	GATA binding protein 1a.	0.550
pax9	LOC101079804	ENSTRUP00000061100	ENSTRUP00000055192	Paired box 9.	Paired box 10.	0.831
pax9	hoxd12	ENSTRUP00000061100	ENSTRUP00000044945	Paired box 9.	Homeobox protein Hox-D12a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.	0.451
pax9	meox2	ENSTRUP00000061100	ENSTRUP00000004634	Paired box 9.	Mesenchyme homeobox 2b.	0.600
pax9	msx1	ENSTRUP00000061100	ENSTRUP00000041027	Paired box 9.	Homeobox domain-containing protein.	0.589
pax9	otx1	ENSTRUP00000061100	ENSTRUP00000027897	Paired box 9.	Orthodenticle homeobox 1.	0.541