STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
greb1Growth regulating estrogen receptor binding 1. (1798 aa)    
Predicted Functional Partners:
esr1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.675
LOC101073984
CREB binding protein a.
    
  0.596
pgr
Progesterone receptor.
   
 0.588
sh3rf3
SH3 domain containing ring finger 3.
      
 0.566
LOC101075495
Estrogen receptor 2b.
    
 0.537
LOC101076140
Estrogen receptor 2a.
    
 0.537
ca12
Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family.
      
 0.530
rara
Retinoic acid receptor alpha; Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The rar/rxr heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5 (By similarity); Belongs to the nuclear hormone receptor family. NR1 subfamily.
    
 0.498
LOC101070643
E1A binding protein p300 a.
    
  0.489
ENSTRUP00000064066
E1A binding protein p300 b.
    
  0.489
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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