STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl7Kelch-like family member 7. (612 aa)    
Predicted Functional Partners:
TOMM7
Translocase of outer mitochondrial membrane 7.
      
 0.726
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.644
ttc8
Tetratricopeptide repeat domain 8.
    
 0.600
usp45
Ubiquitinyl hydrolase 1.
      
 0.543
bbs9
Bardet-Biedl syndrome 9.
    
 0.528
il6r
Fibronectin type-III domain-containing protein.
      
 0.523
klhl22
Kelch-like family member 22.
  
 
0.503
klhl8
Kelch-like family member 8.
  
 
0.493
keap1
Kelch-like ECH-associated protein 1b.
  
 
0.489
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.482
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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