STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065598Syntaxin binding protein 5a (tomosyn). (1145 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.705
LOC101079833
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.600
LOC101063708
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.600
Prkcz
PB1 domain-containing protein.
    
 
 0.595
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.595
exoc4
Exocyst complex component 4.
   
 
 0.574
LOC101073683
Par-6 family cell polarity regulator gamma b.
    
 
 0.553
PARD6B
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 
 0.553
LOC105418538
Partitioning defective 6 homolog alpha-like isoform X1.
    
 
 0.553
stx4
Syntaxin 4; Belongs to the syntaxin family.
    
 
 0.537
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.